Pseudomonas fluorescens Pf0-1, Pfl01_3791
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pfo03070 | Bacterial secretion system | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SMART | SM00912 | Haemagg_act_2a | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 52 | 172 | 3.3E-42 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 378 | 406 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1157 | 1204 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 988 | 1009 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1053 | 1078 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 737 | 806 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 434 | 456 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1469 | 1489 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 438 | 456 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 737 | 767 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 575 | 619 | - |
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 904 | 1064 | 2.2E-11 |
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 783 | 866 | 1.1E-6 |
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 601 | 761 | 5.3E-16 |
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 369 | 440 | 1.6E-5 |
| Pfam | PF05860 | TPS secretion domain | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 47 | 296 | 6.4E-43 |
| SUPERFAMILY | SSF51126 | Pectin lyase-like | IPR011050 | Pectin lyase fold/virulence factor | 45 | 334 | 4.71E-53 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 1169 | 1204 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 588 | 613 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 386 | 401 | - |
| Gene3D | G3DSA:2.160.20.10 | - | IPR012334 | Pectin lyase fold | 43 | 313 | 3.3E-81 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 782 | 806 | - |
| NCBIfam | TIGR01901 | JCVI: filamentous hemagglutinin family N-terminal domain | IPR008638 | Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain | 70 | 160 | 2.9E-14 |
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 455 | 594 | 1.8E-6 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 993 | 1009 | - |
| Pfam | PF13332 | Hemagglutinin repeat | IPR025157 | Hemagglutinin repeat | 1193 | 1346 | 9.3E-19 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.