Pseudomonas fluorescens Pf0-1, Pfl01_3793
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR30386 | MEMBRANE FUSION SUBUNIT OF EMRAB-TOLC MULTIDRUG EFFLUX PUMP | - | - | 30 | 363 | 1.0E-57 |
| Gene3D | G3DSA:1.10.287.470 | Helix hairpin bin | - | - | 99 | 125 | 1.4E-11 |
| SUPERFAMILY | SSF111369 | HlyD-like secretion proteins | - | - | 184 | 303 | 1.31E-13 |
| Gene3D | G3DSA:2.40.50.100 | - | - | - | 67 | 98 | 1.4E-11 |
| Coils | Coil | Coil | - | - | 192 | 226 | - |
| Gene3D | G3DSA:2.40.30.170 | - | - | - | 245 | 367 | 2.6E-34 |
| Coils | Coil | Coil | - | - | 98 | 125 | - |
| Pfam | PF16576 | Barrel-sandwich domain of CusB or HlyD membrane-fusion | IPR032317 | RND efflux pump, membrane fusion protein, barrel-sandwich domain | 65 | 308 | 6.0E-19 |
| PRINTS | PR01490 | Gram-negative bacterial RTX secretion protein D signature | - | - | 76 | 96 | 2.5E-7 |
| SUPERFAMILY | SSF111369 | HlyD-like secretion proteins | - | - | 68 | 192 | 7.98E-8 |
| PRINTS | PR01490 | Gram-negative bacterial RTX secretion protein D signature | - | - | 348 | 363 | 2.5E-7 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.