Pseudomonas fluorescens Pf0-1, Pfl01_3794

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00711
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00711
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016021 integral component of membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00711
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 273 525 1.2E-11
CDD cd17503 MFS_LmrB_MDR_like - - 29 447 1.28428E-98
PANTHER PTHR23501:SF51 MULTIDRUG RESISTANCE PROTEIN B - - 19 518 0.0
TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family IPR004638 Drug resistance transporter EmrB-like 24 475 1.1E-116
PRINTS PR01036 Tetracycline resistance protein TetB signature - - 28 52 1.3E-5
PANTHER PTHR23501 MAJOR FACILITATOR SUPERFAMILY - - 19 518 0.0
PRINTS PR01036 Tetracycline resistance protein TetB signature - - 174 198 1.3E-5
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 30 423 7.2E-40
SUPERFAMILY SSF103473 MFS general substrate transporter IPR036259 MFS transporter superfamily 19 518 1.83E-57
PRINTS PR01036 Tetracycline resistance protein TetB signature - - 149 173 1.3E-5
Gene3D G3DSA:1.20.1720.10 Multidrug resistance protein D - - 26 231 9.8E-35

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.