Pseudomonas fluorescens Pf0-1, Pfl01_4905

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0046565 3-dehydroshikimate dehydratase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_02238
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0046279 3,4-dihydroxybenzoate biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_02238
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfo00130 Ubiquinone and other terpenoid-quinone biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfo00350 Tyrosine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfo01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfo00360 Phenylalanine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd07250 HPPD_C_like IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal 436 622 2.03821E-66
Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain 438 561 6.9E-11
Gene3D G3DSA:3.10.180.10 - IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 288 434 5.9E-40
Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal - - 294 424 1.3E-31
Pfam PF01261 Xylose isomerase-like TIM barrel IPR013022 Xylose isomerase-like, TIM barrel domain 18 262 2.5E-44
Gene3D G3DSA:3.20.20.150 - - - 1 269 1.6E-70
SUPERFAMILY SSF54593 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 293 619 5.21E-63
PANTHER PTHR12110 HYDROXYPYRUVATE ISOMERASE - - 1 336 1.2E-96
SUPERFAMILY SSF51658 Xylose isomerase-like IPR036237 Xylose isomerase-like superfamily 1 268 1.2E-77
Hamap MF_02238 3-dehydroshikimate dehydratase. IPR043700 3-dehydroshikimate dehydratase 1 625 46.241863
Coils Coil Coil - - 64 91 -
CDD cd08342 HPPD_N_like IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal 297 429 5.81675E-27
Gene3D G3DSA:3.10.180.10 - IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 435 630 3.8E-48

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.