Pseudomonas fluorescens Pf0-1, Pfl01_5604 (ubiA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01040
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004659 prenyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01635
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01040
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfo00130 Ubiquinone and other terpenoid-quinone biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfo01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfo01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:1.10.357.140:FF:000002 4-hydroxybenzoate octaprenyltransferase - - 29 174 3.0E-64
NCBIfam TIGR01474 JCVI: 4-hydroxybenzoate polyprenyltransferase IPR006370 4-hydroxybenzoate polyprenyltransferase-like 18 293 5.4E-102
Pfam PF01040 UbiA prenyltransferase family IPR000537 UbiA prenyltransferase family 34 278 2.7E-63
Gene3D G3DSA:1.20.120.1780 UbiA prenyltransferase - - 174 296 1.1E-32
CDD cd13959 PT_UbiA_COQ2 IPR039653 Prenyltransferase 23 292 1.2824E-110
Gene3D G3DSA:1.10.357.140 UbiA prenyltransferase IPR044878 UbiA prenyltransferase superfamily 29 173 3.9E-38
Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. IPR006370 4-hydroxybenzoate polyprenyltransferase-like 12 294 28.411268
PANTHER PTHR11048 PRENYLTRANSFERASES IPR039653 Prenyltransferase 12 294 1.1E-77
FunFam G3DSA:1.20.120.1780:FF:000001 4-hydroxybenzoate octaprenyltransferase - - 175 296 2.4E-40

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.