Pseudomonas fluorescens Pf0-1, Pfl01_5682

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0019673 GDP-mannose metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01472
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008446 GDP-mannose 4,6-dehydratase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01472
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfo00520 Amino sugar and nucleotide sugar metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfo01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfo00051 Fructose and mannose metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 3 318 1.17E-71
Gene3D G3DSA:3.40.50.720 - - - 6 302 0.0
CDD cd05260 GDP_MD_SDR_e - - 5 318 0.0
PANTHER PTHR43715 GDP-MANNOSE 4,6-DEHYDRATASE IPR006368 GDP-mannose 4,6-dehydratase 2 321 2.9E-121
NCBIfam TIGR01472 JCVI: GDP-mannose 4,6-dehydratase IPR006368 GDP-mannose 4,6-dehydratase 3 319 4.4E-127
Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. IPR006368 GDP-mannose 4,6-dehydratase 3 322 52.853706
Gene3D G3DSA:3.90.25.10 - - - 186 312 0.0
Pfam PF16363 GDP-mannose 4,6 dehydratase IPR016040 NAD(P)-binding domain 6 312 5.0E-122
FunFam G3DSA:3.40.50.720:FF:000924 GDP-mannose 4,6 dehydratase - - 1 211 2.4E-61

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.