Pseudomonas fluorescens Pf0-1, Pfl01_5685

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03220
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0140359 ABC-type transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd03220
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00005
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfo02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd03220 ABC_KpsT_Wzt IPR015860 ABC transporter, teichoic acids export TagH-like 4 227 9.2284E-100
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 50 230 1.3E-11
Gene3D G3DSA:2.70.50.60 - - - 260 395 5.5E-31
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 35 237 1.01E-46
PANTHER PTHR46743 TEICHOIC ACIDS EXPORT ATP-BINDING PROTEIN TAGH - - 2 405 9.5E-123
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 29 259 7.7E-47
Pfam PF14524 Wzt C-terminal domain IPR029439 Wzt, C-terminal 261 398 1.8E-32
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 41 173 3.6E-21
CDD cd10147 Wzt_C-like IPR029439 Wzt, C-terminal 262 400 6.44764E-39

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.