Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000804
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0008408 | 3'-5' exonuclease activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF02768
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006260 | DNA replication |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000804
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003887 | DNA-directed DNA polymerase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF02768
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Cellular Component | GO:0009360 | DNA polymerase III complex |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF000804
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | pfe00230 | Purine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pfe03030 | DNA replication | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pfe00240 | Pyrimidine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pfe03440 | Homologous recombination | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pfe01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pfe03430 | Mismatch repair | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
SUPERFAMILY | SSF55979 | DNA clamp | IPR046938 | DNA clamp superfamily | 246 | 367 | 1.69E-37 |
Pfam | PF00712 | DNA polymerase III beta subunit, N-terminal domain | IPR022634 | DNA polymerase III, beta sliding clamp, N-terminal | 1 | 119 | 8.7E-43 |
FunFam | G3DSA:3.10.150.10:FF:000001 | Beta sliding clamp | - | - | 1 | 123 | 5.3E-55 |
Gene3D | G3DSA:3.10.150.10 | DNA Polymerase III, subunit A, domain 2 | - | - | 126 | 248 | 1.2E-39 |
Pfam | PF02768 | DNA polymerase III beta subunit, C-terminal domain | IPR022635 | DNA polymerase III, beta sliding clamp, C-terminal | 247 | 366 | 3.7E-41 |
PANTHER | PTHR30478 | DNA POLYMERASE III SUBUNIT BETA | IPR001001 | DNA polymerase III, beta sliding clamp | 1 | 367 | 4.9E-130 |
SUPERFAMILY | SSF55979 | DNA clamp | IPR046938 | DNA clamp superfamily | 1 | 120 | 3.81E-30 |
CDD | cd00140 | beta_clamp | IPR001001 | DNA polymerase III, beta sliding clamp | 1 | 366 | 0.0 |
NCBIfam | TIGR00663 | JCVI: DNA polymerase III subunit beta | IPR001001 | DNA polymerase III, beta sliding clamp | 1 | 367 | 5.3E-109 |
PIRSF | PIRSF000804 | DNA_pol_III_b | IPR001001 | DNA polymerase III, beta sliding clamp | 1 | 367 | 2.9E-124 |
SUPERFAMILY | SSF55979 | DNA clamp | IPR046938 | DNA clamp superfamily | 128 | 245 | 2.88E-29 |
Pfam | PF02767 | DNA polymerase III beta subunit, central domain | IPR022637 | DNA polymerase III, beta sliding clamp, central | 130 | 244 | 6.4E-40 |
Gene3D | G3DSA:3.10.150.10 | DNA Polymerase III, subunit A, domain 2 | - | - | 1 | 123 | 2.0E-49 |
SMART | SM00480 | pol35 | IPR001001 | DNA polymerase III, beta sliding clamp | 17 | 363 | 0.0 |
Gene3D | G3DSA:3.10.150.10 | DNA Polymerase III, subunit A, domain 2 | - | - | 249 | 367 | 4.0E-34 |