Pseudomonas fluorescens F113, PSF113_0009 (gmhB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0005975 carbohydrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR42891
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016791 phosphatase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR42891
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfe01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe00540 Lipopolysaccharide biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01656 JCVI: histidinol-phosphate phosphatase domain IPR006543 Histidinol-phosphate phosphatase 2 145 8.7E-42
PANTHER PTHR42891 D-GLYCERO-BETA-D-MANNO-HEPTOSE-1,7-BISPHOSPHATE 7-PHOSPHATASE IPR004446 D,D-heptose 1,7-bisphosphate phosphatase 2 174 5.7E-53
PIRSF PIRSF004682 GmhB IPR004446 D,D-heptose 1,7-bisphosphate phosphatase 1 173 6.9E-55
Gene3D G3DSA:3.40.50.1000 - IPR023214 HAD superfamily 1 177 3.6E-56
FunFam G3DSA:3.40.50.1000:FF:000168 D,D-heptose 1,7-bisphosphate phosphatase - - 1 177 1.3E-81
NCBIfam TIGR01662 JCVI: HAD-IIIA family hydrolase IPR006549 HAD-superfamily hydrolase,subfamily IIIA 2 146 7.3E-34
CDD cd07503 HAD_HisB-N - - 2 144 3.55706E-71
SUPERFAMILY SSF56784 HAD-like IPR036412 HAD-like superfamily 1 174 6.92E-46
Pfam PF13242 HAD-hyrolase-like - - 99 168 3.5E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.