Pseudomonas fluorescens F113, PSF113_0010 (glyS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004814 arginine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF05746
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30075
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000166 nucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30075
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004820 glycine-tRNA ligase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30075
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30075
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006426 glycyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR30075
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006420 arginyl-tRNA aminoacylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF05746
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfe00970 Aminoacyl-tRNA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 50 62 1.2E-34
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 7 20 1.2E-34
SUPERFAMILY SSF109604 HD-domain/PDEase-like - - 334 485 8.64E-19
Pfam PF02092 Glycyl-tRNA synthetase beta subunit IPR015944 Glycine-tRNA ligase, beta subunit 6 542 0.0
Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. IPR015944 Glycine-tRNA ligase, beta subunit 3 682 25.333668
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 241 256 1.2E-34
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 313 329 1.2E-34
Pfam PF05746 DALR anticodon binding domain IPR008909 DALR anticodon binding 579 675 1.6E-5
PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature IPR015944 Glycine-tRNA ligase, beta subunit 389 408 1.2E-34
NCBIfam TIGR00211 JCVI: glycine--tRNA ligase subunit beta IPR015944 Glycine-tRNA ligase, beta subunit 5 682 0.0
PANTHER PTHR30075 GLYCYL-TRNA SYNTHETASE IPR006194 Glycine-tRNA synthetase, heterodimeric 3 682 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.