Pseudomonas fluorescens F113, PSF113_0102

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfe01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe00460 Cyanoamino acid metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe00250 Alanine, aspartate and glutamate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00139 Asparaginase/glutaminase family signature IPR006034 Asparaginase/glutaminase-like 12 23 3.0E-14
PIRSF PIRSF500176 L_ASNase - - 8 331 3.9E-78
CDD cd08963 L-asparaginase_I IPR041725 Type I (cytosolic) L-asparaginase 10 323 1.95121E-110
PRINTS PR00139 Asparaginase/glutaminase family signature IPR006034 Asparaginase/glutaminase-like 91 109 3.0E-14
SFLD SFLDS00057 Glutaminase/Asparaginase - - 9 333 0.0
Pfam PF17763 Glutaminase/Asparaginase C-terminal domain IPR040919 Asparaginase/glutaminase, C-terminal 209 324 4.6E-26
PANTHER PTHR11707 L-ASPARAGINASE IPR006034 Asparaginase/glutaminase-like 9 333 1.0E-74
PIRSF PIRSF001220 L-ASNase_gatD IPR006034 Asparaginase/glutaminase-like 8 333 6.2E-67
Gene3D G3DSA:3.40.50.1170 - IPR037152 L-asparaginase, N-terminal domain superfamily 7 201 7.6E-48
Gene3D G3DSA:3.40.50.40 - IPR027473 L-asparaginase, C-terminal 208 334 6.5E-38
SMART SM00870 Asparaginase_2 IPR006034 Asparaginase/glutaminase-like 11 322 1.8E-96
SUPERFAMILY SSF53774 Glutaminase/Asparaginase IPR036152 Asparaginase/glutaminase-like superfamily 8 334 5.1E-84
FunFam G3DSA:3.40.50.40:FF:000001 L-asparaginase 1 - - 208 334 6.1E-37
Pfam PF00710 Asparaginase, N-terminal IPR027474 L-asparaginase, N-terminal 11 182 2.3E-41
PRINTS PR00139 Asparaginase/glutaminase family signature IPR006034 Asparaginase/glutaminase-like 259 277 3.0E-14

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.