Pseudomonas fluorescens F113, PSF113_0152

Gene Feature Overview

Strain	Pseudomonas fluorescens F113 GCF_000237065.1|latest
Locus Tag	PSF113_0152
Name
Replicon	chromosome
Genomic location	164061 - 165281 (+ strand)

Cross-References

RefSeq	YP_005205585.1
GI	378948097
EC Number	2.8.3.16
Entrez	11828229
INSDC	AEV60190.1
NCBI Locus Tag	PSF113_0152
UniParc	UPI00023B3B39
UniProtKB Acc	G8PY95
UniProtKB ID	G8PY95_PSEFL
UniRef100	UniRef100_G8PY95
UniRef50	UniRef50_Q0K3D9
UniRef90	UniRef90_A0A0B7D2I0

Product

Feature Type	CDS
Coding Frame	1
Product Name	L-carnitine dehydratase/bile acid-inducible protein F
Synonyms
Evidence for Translation
Charge (pH 7)	-4.16
Kyte-Doolittle Hydrophobicity Value	-0.064
Molecular Weight (kDa)	43503.2
Isoelectric Point (pI)	6.11

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 312 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000437 (532 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSF113_0152 Search term: L-carnitine dehydratase/bile acid-inducible protein F

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000338475 succinyl-CoA:glutarate-CoA transferase [Source:HGNC Symbol;Acc:HGNC:16001] E-value: 3.4e-99 Percent Identity: 45.7

References