Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006310 | DNA recombination |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00644
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006281 | DNA repair |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00644
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003676 | nucleic acid binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF02272
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0008409 | 5'-3' exonuclease activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00644
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Database | Xref | Pathway | Version | Evidence | PMID |
---|---|---|---|---|---|
KEGG | pfe03440 | Homologous recombination | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pfe03430 | Mismatch repair | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
KEGG | pfe03410 | Base excision repair | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
FunFam | G3DSA:3.90.1640.30:FF:000001 | Single-stranded-DNA-specific exonuclease RecJ | - | - | 46 | 320 | 6.0E-125 |
Pfam | PF01368 | DHH family | IPR001667 | DDH domain | 69 | 226 | 1.3E-19 |
PANTHER | PTHR30255 | SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASE RECJ | - | - | 18 | 568 | 0.0 |
Gene3D | G3DSA:3.90.1640.30 | - | - | - | 45 | 320 | 2.8E-87 |
Pfam | PF17768 | RecJ OB domain | IPR041122 | RecJ, OB domain | 461 | 564 | 2.0E-18 |
NCBIfam | TIGR00644 | JCVI: single-stranded-DNA-specific exonuclease RecJ | IPR004610 | Bacterial RecJ exonuclease | 20 | 565 | 0.0 |
Pfam | PF02272 | DHHA1 domain | IPR003156 | DHHA1 domain | 316 | 444 | 5.2E-23 |
SUPERFAMILY | SSF64182 | DHH phosphoesterases | IPR038763 | DHH phosphoesterase superfamily | 44 | 457 | 4.58E-117 |
Gene3D | G3DSA:3.10.310.30 | - | - | - | 321 | 448 | 3.2E-33 |