Pseudomonas fluorescens F113, PSF113_1072 (mdoD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0030246 carbohydrate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:2.70.98.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF74650
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0042597 periplasmic space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04349
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0005975 carbohydrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF74650
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016051 carbohydrate biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF04349
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF74650 Galactose mutarotase-like IPR011013 Galactose mutarotase-like domain superfamily 43 417 0.0
Gene3D G3DSA:2.60.40.10 Immunoglobulins IPR013783 Immunoglobulin-like fold 419 539 3.3E-26
Gene3D G3DSA:2.70.98.10 - IPR014718 Glycoside hydrolase-type carbohydrate-binding 42 415 0.0
SUPERFAMILY SSF81296 E set domains IPR014756 Immunoglobulin E-set 419 534 1.19E-27
Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal 43 531 0.0
PIRSF PIRSF006281 MdoG IPR014438 Glucan biosynthesis protein MdoG/MdoD 1 535 0.0
PANTHER PTHR30504 GLUCANS BIOSYNTHESIS PROTEIN IPR014438 Glucan biosynthesis protein MdoG/MdoD 2 536 0.0
Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. IPR023724 Glucan biosynthesis, MdoD 1 541 58.226685

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.