Pseudomonas fluorescens F113, PSF113_1221

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0003333 amino acid transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF039085
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015424 ATPase-coupled amino acid transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF039085
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00005
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfe02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 28 226 1.0E-15
CDD cd03262 ABC_HisP_GlnQ - - 4 225 1.54214E-123
PANTHER PTHR43166 AMINO ACID IMPORT ATP-BINDING PROTEIN - - 4 250 8.1E-84
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 19 178 1.5E-33
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 2 254 9.5E-80
FunFam G3DSA:3.40.50.300:FF:000020 Amino acid ABC transporter ATP-binding component - - 2 253 2.1E-109
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 4 248 1.33E-72
PIRSF PIRSF039085 ABC_ATPase_HisP IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type 1 254 2.3E-114

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.