Pseudomonas fluorescens F113, PSF113_2714

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00512
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00065
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00512
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.30.565.10:FF:000010 Sensor histidine kinase RcsC - - 553 715 3.3E-48
Pfam PF13185 GAF domain IPR003018 GAF domain 254 388 8.1E-16
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 892 994 3.9E-14
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 601 713 2.5E-36
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 890 1004 1.3E-12
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 890 1018 2.99E-18
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 697 710 4.6E-16
PANTHER PTHR45339 HYBRID SIGNAL TRANSDUCTION HISTIDINE KINASE J - - 382 946 0.0
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 486 554 1.5E-18
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1036 1150 4.9E-36
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1038 1150 1.13923E-38
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1038 1150 4.5E-25
CDD cd19410 HK9-like_sensor - - 50 171 3.7713E-35
Gene3D G3DSA:3.40.50.2300 - - - 888 1035 4.9E-18
MobiDBLite mobidb-lite consensus disorder prediction - - 437 460 -
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 543 713 7.47E-46
Gene3D G3DSA:3.30.450.40 - IPR029016 GAF-like domain superfamily 234 399 2.8E-22
Coils Coil Coil - - 158 178 -
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 553 714 4.3E-48
Pfam PF05227 CHASE3 domain IPR007891 CHASE3 46 178 1.5E-38
CDD cd16922 HATPase_EvgS-ArcB-TorS-like - - 606 710 1.16595E-48
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 487 550 7.17523E-13
Coils Coil Coil - - 603 623 -
SMART SM00065 gaf_1 IPR003018 GAF domain 253 397 2.4E-12
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 656 666 4.6E-16
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 768 883 5.98E-26
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 601 711 1.1E-26
Gene3D G3DSA:1.10.287.130 - - - 453 552 2.6E-24
CDD cd00156 REC - - 893 992 1.3279E-13
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 471 555 6.87E-21
Gene3D G3DSA:3.40.50.2300 - - - 1036 1159 5.8E-41
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1034 1155 7.26E-37
Coils Coil Coil - - 389 483 -
Coils Coil Coil - - 871 891 -
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 673 691 4.6E-16
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 770 876 1.3E-15
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 487 554 1.3E-15
SUPERFAMILY SSF55781 GAF domain-like - - 247 415 9.03E-24
Gene3D G3DSA:3.40.50.2300 - - - 770 887 7.4E-25
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 638 652 4.6E-16
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 768 878 8.2E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.