Pseudomonas fluorescens F113, PSF113_2720 (kaiC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd19488 KaiC-like_N - - 12 237 4.95801E-128
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 13 238 2.46E-36
Pfam PF06745 KaiC IPR014774 KaiC-like domain 13 239 1.1E-39
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 248 490 2.6E-47
CDD cd19487 KaiC-like_C - - 254 471 2.69192E-117
PIRSF PIRSF039117 KaiC IPR030665 Circadian clock protein kinase KaiC 1 497 0.0
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 5 239 1.3E-47
PRINTS PR01874 DNA repair protein radA signature - - 263 291 7.5E-6
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 29 216 7.5E-5
PRINTS PR01874 DNA repair protein radA signature - - 404 432 7.5E-6
Pfam PF06745 KaiC IPR014774 KaiC-like domain 255 474 2.7E-30
PANTHER PTHR42926 - - - 9 490 0.0
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 253 485 2.64E-39
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 271 435 1.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.