Pseudomonas fluorescens F113, PSF113_2733

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006633 fatty acid biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016746 transferase activity, transferring acyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF53901
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfe00061 Fatty acid biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe01212 Fatty acid metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfe00780 Biotin metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd00834 KAS_I_II IPR000794 Beta-ketoacyl synthase 8 423 0.0
Gene3D G3DSA:3.40.47.10 - IPR016039 Thiolase-like 1 429 3.1E-128
PIRSF PIRSF000447 KAS_II IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 5 428 0.0
PANTHER PTHR11712 POLYKETIDE SYNTHASE-RELATED IPR000794 Beta-ketoacyl synthase 7 425 0.0
SMART SM00825 Beta-ketoacyl synthase IPR020841 Polyketide synthase, beta-ketoacyl synthase domain 10 426 1.0E-13
SUPERFAMILY SSF53901 Thiolase-like IPR016039 Thiolase-like 230 426 6.91E-65
NCBIfam TIGR03150 JCVI: beta-ketoacyl-ACP synthase II IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 8 424 0.0
SUPERFAMILY SSF53901 Thiolase-like IPR016039 Thiolase-like 8 266 4.19E-70
Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain IPR014030 Beta-ketoacyl synthase, N-terminal 8 261 1.0E-54
Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain IPR014031 Beta-ketoacyl synthase, C-terminal 269 382 2.8E-36
FunFam G3DSA:3.40.47.10:FF:000009 3-oxoacyl-[acyl-carrier-protein] synthase 2 - - 5 426 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.