Pseudomonas fluorescens F113, PSF113_2996 (nosD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 212 233 5500.0
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 138 167 1400.0
MobiDBLite mobidb-lite consensus disorder prediction - - 416 437 -
Gene3D G3DSA:2.160.20.10 - IPR012334 Pectin lyase fold 38 361 3.8E-19
Pfam PF05048 Periplasmic copper-binding protein (NosD) IPR007742 Periplasmic copper-binding protein NosD, beta helix domain 144 357 1.3E-53
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 190 211 1400.0
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 234 256 1400.0
SMART SM00722 complete IPR006633 Carbohydrate-binding/sugar hydrolysis domain 194 368 3.5E-31
SMART SM00722 complete IPR006633 Carbohydrate-binding/sugar hydrolysis domain 39 188 2.5E-25
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 86 114 780.0
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 168 189 18.0
TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat IPR022441 Parallel beta-helix repeat-2 162 201 2.5E-7
TIGRFAM TIGR04247 NosD_copper_fam: nitrous oxide reductase family maturation protein NosD IPR026464 Nitrous oxide reductase family maturation protein NosD 39 421 0.0
SUPERFAMILY SSF51126 Pectin lyase-like IPR011050 Pectin lyase fold/virulence factor 17 409 2.18E-55
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 116 137 12.0
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 293 314 100.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.