Pseudomonas fluorescens F113, PSF113_3000

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00005
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfe03420 Nucleotide excision repair 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 362 397 -
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 38 518 1.17E-30
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 565 873 2.57E-47
Gene3D G3DSA:1.20.1580.10 ABC transporter ATPase like domain - - 125 436 0.0
MobiDBLite mobidb-lite consensus disorder prediction - - 608 629 -
PANTHER PTHR43152 UVRABC SYSTEM PROTEIN A - - 160 901 0.0
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 556 896 0.0
Gene3D G3DSA:1.20.1580.10 ABC transporter ATPase like domain - - 652 789 0.0
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 39 541 0.0
Gene3D G3DSA:1.10.8.280 - - - 183 307 0.0
Pfam PF17755 UvrA DNA-binding domain IPR041552 UvrA DNA-binding domain 189 301 6.2E-13
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 569 820 1.5E-8

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.