Pseudomonas fluorescens F113, PSF113_3045

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01414
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01414 JCVI: outer membrane autotransporter barrel domain IPR006315 Outer membrane autotransporter barrel domain 24 206 3.0E-6
SUPERFAMILY SSF56925 OMPA-like IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel 31 230 1.78E-27
Pfam PF13505 Outer membrane protein beta-barrel domain IPR027385 Outer membrane protein beta-barrel domain 17 230 3.8E-18
Gene3D G3DSA:2.40.160.20 - - - 29 231 1.2E-33

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.