Pseudomonas fluorescens F113, PSF113_3208 (dhcB)

Gene Feature Overview

Strain	Pseudomonas fluorescens F113 GCF_000237065.1|latest
Locus Tag	PSF113_3208
Name	dhcB
Replicon	chromosome
Genomic location	3778798 - 3779463 (- strand)

Cross-References

RefSeq	YP_005208602.1
GI	378951114
EC Number	2.8.3.5
EC Number	2.8.3.6
Entrez	11831300
INSDC	AEV63207.1
NCBI Locus Tag	PSF113_3208
UniParc	UPI0002040C6C
UniProtKB Acc	G8Q6H8
UniProtKB ID	G8Q6H8_PSEFL
UniRef100	UniRef100_A0A0D0S758
UniRef50	UniRef50_Q4KEA4
UniRef90	UniRef90_Q4KEA4

Product

Feature Type	CDS
Coding Frame	1
Product Name	protein DhcB
Synonyms
Evidence for Translation
Charge (pH 7)	-9.34
Kyte-Doolittle Hydrophobicity Value	0.215
Molecular Weight (kDa)	23.4
Isoelectric Point (pI)	4.49

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 273 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003435 (528 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSF113_3208 Search term: dhcB Search term: protein DhcB

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000196371 3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527] E-value: 5.6e-56 Percent Identity: 50.5
Ensembl 110, assembly GRCh38.p14	ENSP00000425348 3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527] E-value: 5.6e-56 Percent Identity: 50.5

References