Pseudomonas fluorescens F113, PSF113_3424 (nosD2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 149 187 3800.0
NCBIfam TIGR04247 JCVI: nitrous oxide reductase family maturation protein NosD IPR026464 Nitrous oxide reductase family maturation protein NosD 2 254 5.8E-95
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 23 44 240.0
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 67 89 1300.0
SMART SM00722 complete IPR006633 Carbohydrate-binding/sugar hydrolysis domain 27 201 4.3E-27
Gene3D G3DSA:2.160.20.10 - IPR012334 Pectin lyase fold 2 202 3.7E-18
NCBIfam TIGR03804 JCVI: parallel beta-helix repeat (two copies) IPR022441 Parallel beta-helix repeat-2 17 54 5.6E-5
NCBIfam TIGR03804 JCVI: parallel beta-helix repeat (two copies) IPR022441 Parallel beta-helix repeat-2 6 35 3.6E-5
SUPERFAMILY SSF51126 Pectin lyase-like IPR011050 Pectin lyase fold/virulence factor 8 242 9.98E-35
Pfam PF05048 Periplasmic copper-binding protein (NosD) IPR007742 Periplasmic copper-binding protein NosD, beta helix domain 2 190 3.4E-49
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 126 147 120.0
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 45 66 3000.0
SMART SM00710 pbh1 IPR006626 Parallel beta-helix repeat 1 22 60.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.