Pseudomonas fluorescens F113, PSF113_5779 (tonB6)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF03544
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 53 153 -
PRINTS PR01217 Proline rich extensin signature - - 72 88 1.3E-12
NCBIfam TIGR01352 JCVI: TonB family C-terminal domain IPR006260 TonB/TolA, C-terminal 168 246 1.7E-18
MobiDBLite mobidb-lite consensus disorder prediction - - 103 121 -
PRINTS PR01217 Proline rich extensin signature - - 91 108 1.3E-12
Pfam PF03544 Gram-negative bacterial TonB protein C-terminal IPR037682 TonB, C-terminal 167 245 5.0E-16
PRINTS PR01217 Proline rich extensin signature - - 109 134 1.3E-12
SUPERFAMILY SSF74653 TolA/TonB C-terminal domain - - 160 242 1.44E-18
MobiDBLite mobidb-lite consensus disorder prediction - - 53 76 -
PRINTS PR01217 Proline rich extensin signature - - 49 70 1.3E-12
Gene3D G3DSA:3.30.1150.10 - - - 121 247 1.4E-32
MobiDBLite mobidb-lite consensus disorder prediction - - 124 153 -
PANTHER PTHR33446 PROTEIN TONB-RELATED - - 7 248 2.2E-17

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.