Pseudomonas fluorescens F113, PSF113_5780 (oxyR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5780
Name
oxyR
Replicon chromosome
Genomic location 6656631 - 6657551 (+ strand)

Cross-References

RefSeq YP_005211149.1
GI 378953661
Entrez 11833902
INSDC AEV65754.1
NCBI Locus Tag PSF113_5780
UniParc UPI0002040A90
UniProtKB Acc G8Q6Z8
UniProtKB ID G8Q6Z8_PSEFL
UniRef100 UniRef100_A0A0D0RGS6
UniRef50 UniRef50_Q4K3Q5
UniRef90 UniRef90_Q4K3Q5

Product

Feature Type CDS
Coding Frame 1
Product Name
protein OxyR
Synonyms
Evidence for Translation
Charge (pH 7) 1.76
Kyte-Doolittle Hydrophobicity Value 0.033
Molecular Weight (kDa) 33.6
Isoelectric Point (pI) 7.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4X6G DNA BINDING PROTEIN 12/08/14 Full-length OxyR C199D from pseudomonas aeruginosa Pseudomonas aeruginosa PAO1 2 X-RAY DIFFRACTION 90.4

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 536 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004912 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5780
Search term: oxyR
Search term: protein OxyR

Human Homologs

References

No references are associated with this feature.