Pseudomonas fluorescens F113, PSF113_5786 (tagR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_5786
Name
tagR
Replicon chromosome
Genomic location 6664265 - 6665992 (- strand)

Cross-References

RefSeq YP_005211155.1
GI 378953667
Entrez 11833908
INSDC AEV65760.1
NCBI Locus Tag PSF113_5786
UniParc UPI00023B3B81
UniProtKB Acc G8Q704
UniProtKB ID G8Q704_PSEFL
UniRef100 UniRef100_G8Q704
UniRef50 UniRef50_Q4K3Q0
UniRef90 UniRef90_G8Q704

Product

Feature Type CDS
Coding Frame 1
Product Name
protein TagR
Synonyms
Evidence for Translation
Charge (pH 7) -4.31
Kyte-Doolittle Hydrophobicity Value -0.294
Molecular Weight (kDa) 62867.6
Isoelectric Point (pI) 5.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 73 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000070 (413 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_5786
Search term: tagR
Search term: protein TagR

Human Homologs

References

No references are associated with this feature.