Pseudomonas fluorescens F113, PSF113_5807 (vgrG1a)

Cytoplasmic Membrane
Outer Membrane
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP


Database Xref Pathway Version Evidence PMID
KEGG pfe03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA: 14 331 0.0
SUPERFAMILY SSF69255 364 452 6.28E-35
TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 24 506 0.0
TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 11 523 0.0
SUPERFAMILY SSF69279 189 362 4.08E-38
Gene3D G3DSA:3.30.1920.30 224 286 0.0
SUPERFAMILY SSF69279 11 184 2.21E-60
Pfam PF05954 Phage late control gene D protein (GPD) 30 329 1.2E-105
SUPERFAMILY SSF69349 442 617 1.33E-40
Gene3D G3DSA: 98 189 0.0
Gene3D G3DSA: IPR037026 Vgr protein, OB-fold domain superfamily 355 457 1.1E-47

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.