Pseudomonas fluorescens F113, PSF113_5889 (wzt)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00211
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00211
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfe02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.300 28 257 1.5E-46
ProSiteProfiles PS50893 ATP-binding cassette, ABC transporter-type domain profile. IPR003439 ABC transporter-like 4 245 18.394
SMART SM00382 IPR003593 AAA+ ATPase domain 50 222 2.8E-10
ProSitePatterns PS00211 ABC transporters family signature. IPR017871 ABC transporter, conserved site 146 160 -
Gene3D G3DSA:2.70.50.60 258 395 2.3E-19
SUPERFAMILY SSF52540 IPR027417 P-loop containing nucleoside triphosphate hydrolase 38 240 1.7E-47
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like 41 173 6.1E-21
Pfam PF14524 Wzt C-terminal domain IPR029439 Wzt, C-terminal 260 398 5.5E-33
CDD cd03220 ABC_KpsT_Wzt 4 227 3.94429E-102
CDD cd10147 Wzt_C-like IPR029439 Wzt, C-terminal 259 401 4.25777E-41

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.