Pseudomonas fluorescens SBW25, PFLU0115

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055114 oxidation-reduction process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02770
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02771
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02770
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003995 acyl-CoA dehydrogenase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PS00073
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal 240 385 3.0E-26
SUPERFAMILY SSF56645 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily 7 238 2.88E-77
Pfam PF02770 Acyl-CoA dehydrogenase, middle domain IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain 136 227 2.9E-20
ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. IPR006089 Acyl-CoA dehydrogenase, conserved site 345 364 -
SUPERFAMILY SSF47203 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal 242 391 2.09E-41
Gene3D G3DSA:2.40.110.10 135 239 4.5E-36
Gene3D G3DSA:1.20.140.10 241 393 8.8E-41
Gene3D G3DSA:1.10.540.10 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily 2 134 4.6E-44
Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal 20 132 8.0E-36
CDD cd01151 GCD 7 392 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.