Pseudomonas fluorescens SBW25, PFLU0462 (rfaF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016757 | transferase activity, transferring glycosyl groups |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02195
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0009103 | lipopolysaccharide biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02195
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG (InterPro) | 00231 | Puromycin biosynthesis | InterPro 5.8-49.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
0 |
| UniPathway | UPA00958 | LPS core biosynthesis | InterPro 5.8-49.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
0 |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | - | - | 159 | 337 | 2.7E-52 |
| Pfam | PF01075 | Glycosyltransferase family 9 (heptosyltransferase) | IPR002201 | Glycosyl transferase, family 9 | 69 | 318 | 6.3E-86 |
| NCBIfam | TIGR02195 | JCVI: lipopolysaccharide heptosyltransferase II | IPR011910 | ADP-heptose--LPS heptosyltransferase 2 | 2 | 337 | 0.0 |
| CDD | cd03789 | GT9_LPS_heptosyltransferase | IPR002201 | Glycosyl transferase, family 9 | 2 | 335 | 5.066E-86 |
| FunFam | G3DSA:3.40.50.2000:FF:000023 | ADP-heptose--LPS heptosyltransferase II | - | - | 159 | 338 | 8.0E-72 |
| PANTHER | PTHR30160 | TETRAACYLDISACCHARIDE 4'-KINASE-RELATED | - | - | 1 | 337 | 7.9E-74 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | - | - | 1 | 336 | 1.76E-99 |
| FunFam | G3DSA:3.40.50.2000:FF:000022 | ADP-heptose--LPS heptosyltransferase II | - | - | 2 | 147 | 9.8E-79 |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | - | - | 2 | 145 | 1.9E-37 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.