Pseudomonas fluorescens SBW25, PFLU0462 (rfaF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009103 lipopolysaccharide biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02195
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016757 transferase activity, transferring glycosyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02195
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II IPR011910 ADP-heptose--LPS heptosyltransferase 2 2 337 0.0
PANTHER PTHR30160 TETRAACYLDISACCHARIDE 4'-KINASE-RELATED - - 1 338 1.1E-117
Gene3D G3DSA:3.40.50.2000 Glycogen Phosphorylase B; - - 159 337 2.7E-52
CDD cd03789 GT9_LPS_heptosyltransferase IPR002201 Glycosyl transferase, family 9 2 335 4.49756E-86
PANTHER PTHR30160:SF7 ADP-HEPTOSE--LPS HEPTOSYLTRANSFERASE 2 - - 1 338 1.1E-117
SUPERFAMILY SSF53756 UDP-Glycosyltransferase/glycogen phosphorylase - - 1 336 1.76E-99
Gene3D G3DSA:3.40.50.2000 Glycogen Phosphorylase B; - - 2 145 1.9E-37
Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) IPR002201 Glycosyl transferase, family 9 69 318 6.3E-86

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.