Pseudomonas fluorescens SBW25, PFLU0465 (rfaP)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0016301	kinase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF037318	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0009103	lipopolysaccharide biosynthetic process	ISM Inferred from Sequence Model Term mapped from: InterPro:PIRSF037318	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
UniPathway	UPA00958	LPS core biosynthesis	InterPro 5.8-49.0	ECO:0000259 match to InterPro signature evidence used in automatic assertion	0
KEGG (InterPro)	00540	Lipopolysaccharide biosynthesis	InterPro 5.8-49.0	ECO:0000259 match to InterPro signature evidence used in automatic assertion	0
KEGG (InterPro)	00680	Methane metabolism	InterPro 5.8-49.0	ECO:0000259 match to InterPro signature evidence used in automatic assertion	0
KEGG (InterPro)	00900	Terpenoid backbone biosynthesis	InterPro 5.8-49.0	ECO:0000259 match to InterPro signature evidence used in automatic assertion	0

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF06293	Lipopolysaccharide kinase (Kdo/WaaP) family	-	-	21	231	1.4E-58
PIRSF	PIRSF037318	RfaP	IPR017172	Lipopolysaccharide core heptose(I) kinase RfaP	2	266	4.8E-116
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	IPR011009	Protein kinase-like domain superfamily	29	216	7.67E-9

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.