Pseudomonas fluorescens SBW25, PFLU0482 (hldE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016773 phosphotransferase activity, alcohol group as acceptor
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01603
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016779 nucleotidyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01603
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01467
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01467
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0005975 carbohydrate metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd01172
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
UniPathway UPA00356 ADP-L-glycero-beta-D-manno-heptose biosynthesis InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion 		0
KEGG (InterPro) 00540 Lipopolysaccharide biosynthesis InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion 		0

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF53613 Ribokinase-like IPR029056 Ribokinase-like 12 309 2.34E-58
Gene3D G3DSA:3.40.50.620 HUPs IPR014729 Rossmann-like alpha/beta/alpha sandwich fold 322 474 8.3E-40
SUPERFAMILY SSF52374 Nucleotidylyl transferase - - 340 470 1.85E-24
FunFam G3DSA:3.40.50.620:FF:000028 Bifunctional protein HldE - - 319 474 1.5E-71
Hamap MF_01603 Bifunctional protein HldE [hldE]. IPR023030 Bifunctional protein HldE 4 473 42.809349
NCBIfam TIGR00125 JCVI: cytidyltransferase-like domain IPR004821 Cytidyltransferase-like domain 341 407 3.6E-16
Pfam PF00294 pfkB family carbohydrate kinase IPR011611 Carbohydrate kinase PfkB 13 303 9.6E-46
Pfam PF01467 Cytidylyltransferase-like IPR004821 Cytidyltransferase-like domain 344 437 1.6E-15
PANTHER PTHR46969 BIFUNCTIONAL PROTEIN HLDE - - 3 315 7.4E-120
NCBIfam TIGR02198 JCVI: D-glycero-beta-D-manno-heptose-7-phosphate kinase IPR011913 RfaE bifunctional protein, domain I 5 312 1.8E-123
NCBIfam TIGR02199 JCVI: D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase IPR011914 RfaE bifunctional protein, domain II 331 471 3.2E-63
Gene3D G3DSA:3.40.1190.20 - IPR029056 Ribokinase-like 2 308 1.4E-111
CDD cd01172 RfaE_like IPR011913 RfaE bifunctional protein, domain I 13 309 2.4005E-125
FunFam G3DSA:3.40.1190.20:FF:000002 Bifunctional protein HldE - - 2 308 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.