Pseudomonas fluorescens SBW25, PFLU0483

Gene Feature Overview

Strain	Pseudomonas fluorescens SBW25 GCF_000009225.2|latest
Locus Tag	PFLU0483
Name
Replicon	chromosome
Genomic location	548779 - 549705 (+ strand)

Cross-References

RefSeq	YP_002870158.1
GI	229588039
Entrez	7816462
INSDC	CAY46759.1
UniParc	UPI00019D9ABA
UniProtKB Acc	C3KDB9
UniProtKB ID	C3KDB9_PSEFS
UniRef100	UniRef100_C3KDB9
UniRef50	UniRef50_K9NPM9
UniRef90	UniRef90_E2XKB6

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative lipopolysaccharide biosynthesis-related epimerase/dehydratase
Synonyms
Evidence for Translation
Charge (pH 7)	-4.35
Kyte-Doolittle Hydrophobicity Value	-0.017
Molecular Weight (kDa)	33.0
Isoelectric Point (pI)	5.90

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 651 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001617 (520 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFLU0483 Search term: putative lipopolysaccharide biosynthesis-related epimerase/dehydratase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000283148 UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729] E-value: 1.1e-30 Percent Identity: 31.2
Ensembl 110, assembly GRCh38.p14	ENSP00000387019 UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729] E-value: 1.1e-30 Percent Identity: 31.2

References