Pseudomonas fluorescens SBW25, PFLU1321

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0005509	calcium ion binding	ISM Inferred from Sequence Model Term mapped from: InterPro:G3DSA:4.10.1080.10	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PR01021	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	173	189	2.9E-16
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	127	149	2.9E-16
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	158	173	2.9E-16
Pfam	PF00691	OmpA family	IPR006665	OmpA-like domain	127	223	9.5E-24
PRINTS	PR01023	Sodium-type flagellar protein MotY precursor signature	-	-	114	141	2.3E-6
Gene3D	G3DSA:3.30.1330.60	-	IPR036737	OmpA-like domain superfamily	108	231	1.8E-38
SUPERFAMILY	SSF103088	OmpA-like	IPR036737	OmpA-like domain superfamily	103	229	4.32E-35
CDD	cd07185	OmpA_C-like	IPR006665	OmpA-like domain	122	229	9.1257E-47
PRINTS	PR01023	Sodium-type flagellar protein MotY precursor signature	-	-	173	190	2.3E-6
Gene3D	G3DSA:4.10.1080.10	-	IPR028974	TSP type-3 repeat	57	103	8.8E-6
PRINTS	PR01023	Sodium-type flagellar protein MotY precursor signature	-	-	212	231	2.3E-6
SUPERFAMILY	SSF103647	TSP type-3 repeat	IPR028974	TSP type-3 repeat	68	101	4.97E-9
PANTHER	PTHR30329	STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX	-	-	119	230	1.6E-32

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.