Pseudomonas fluorescens SBW25, PFLU1327

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction 330 381 -
ProSiteProfiles PS51123 OmpA-like domain profile. IPR006665 OmpA-like domain 184 301 23.838
MobiDBLite mobidb-lite consensus disorder prediction 76 95 -
SUPERFAMILY SSF103088 IPR036737 OmpA-like domain superfamily 202 297 3.01E-20
Gene3D G3DSA:3.30.1330.60 IPR036737 OmpA-like domain superfamily 159 303 4.0E-22
CDD cd07185 OmpA_C-like IPR006665 OmpA-like domain 214 297 2.09419E-22
MobiDBLite mobidb-lite consensus disorder prediction 40 62 -
Pfam PF00691 OmpA family IPR006665 OmpA-like domain 214 291 2.0E-10
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 5.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.