Pseudomonas fluorescens SBW25, PFLU3027

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. - - 6 192 6.9E-5
Gene3D G3DSA:3.40.50.720 - - - 1 255 2.4E-72
PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature IPR002347 Short-chain dehydrogenase/reductase SDR 78 89 1.4E-8
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 7 24 1.2E-26
PANTHER PTHR43658:SF11 3-HYDROXYACYL-COA DEHYDROGENASE TYPE-2 - - 1 253 5.9E-92
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 161 180 1.2E-26
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 3 250 7.54E-62
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 78 89 1.2E-26
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 135 151 1.2E-26
PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature IPR002347 Short-chain dehydrogenase/reductase SDR 161 180 1.4E-8
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 182 199 1.2E-26
PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature IPR002347 Short-chain dehydrogenase/reductase SDR 141 149 1.4E-8
PRINTS PR00081 Glucose/ribitol dehydrogenase family signature IPR002347 Short-chain dehydrogenase/reductase SDR 216 236 1.2E-26
PANTHER PTHR43658 SHORT-CHAIN DEHYDROGENASE/REDUCTASE - - 1 253 5.9E-92
Pfam PF00106 short chain dehydrogenase IPR002347 Short-chain dehydrogenase/reductase SDR 6 202 2.3E-43

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.