Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0003700 | DNA-binding transcription factor activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
Gene3D | G3DSA:1.10.10.10 | - | IPR036388 | Winged helix-like DNA-binding domain superfamily | 1 | 80 | 6.4E-19 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 17 | 28 | 2.1E-8 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 163 | 261 | 6.8E-35 |
Pfam | PF03466 | LysR substrate binding domain | IPR005119 | LysR, substrate-binding | 90 | 286 | 9.9E-37 |
Gene3D | G3DSA:3.40.190.10 | - | - | - | 90 | 273 | 6.8E-35 |
Pfam | PF00126 | Bacterial regulatory helix-turn-helix protein, lysR family | IPR000847 | Transcription regulator HTH, LysR | 3 | 61 | 2.5E-17 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 38 | 49 | 2.1E-8 |
SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 90 | 287 | 4.07E-36 |
PANTHER | PTHR30126 | HTH-TYPE TRANSCRIPTIONAL REGULATOR | - | - | 1 | 287 | 1.6E-51 |
SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | IPR036390 | Winged helix DNA-binding domain superfamily | 3 | 77 | 1.52E-15 |
PRINTS | PR00039 | LysR bacterial regulatory protein HTH signature | IPR000847 | Transcription regulator HTH, LysR | 28 | 38 | 2.1E-8 |
CDD | cd08427 | PBP2_LTTR_like_2 | - | - | 89 | 281 | 1.27886E-82 |