Pseudomonas fluorescens SBW25, PFLU4754 (astD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.309.10
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00171
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0043824 succinylglutamate-semialdehyde dehydrogenase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03240
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006527 arginine catabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03240
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
UniPathway UPA00185 L-arginine degradation via AST pathway InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
0
KEGG (InterPro) 00330 Arginine and proline metabolism InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
0

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.605.10 Aldehyde Dehydrogenase; Chain A, domain 1 IPR016162 Aldehyde dehydrogenase, N-terminal 8 450 0.0
FunFam G3DSA:3.40.605.10:FF:000010 N-succinylglutamate 5-semialdehyde dehydrogenase - - 8 253 6.9E-104
NCBIfam TIGR03240 JCVI: succinylglutamate-semialdehyde dehydrogenase IPR017649 Succinylglutamate-semialdehyde dehydrogenase 4 486 0.0
PANTHER PTHR11699 ALDEHYDE DEHYDROGENASE-RELATED - - 2 460 3.0E-92
SUPERFAMILY SSF53720 ALDH-like IPR016161 Aldehyde/histidinol dehydrogenase 3 456 1.26E-123
FunFam G3DSA:3.40.309.10:FF:000013 N-succinylglutamate 5-semialdehyde dehydrogenase - - 248 438 1.3E-91
CDD cd07095 ALDH_SGSD_AstD IPR017649 Succinylglutamate-semialdehyde dehydrogenase 39 470 0.0
Gene3D G3DSA:3.40.309.10 Aldehyde Dehydrogenase; Chain A, domain 2 IPR016163 Aldehyde dehydrogenase, C-terminal 248 438 0.0
Pfam PF00171 Aldehyde dehydrogenase family IPR015590 Aldehyde dehydrogenase domain 10 461 5.9E-122
Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. IPR017649 Succinylglutamate-semialdehyde dehydrogenase 2 487 58.450832

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.