Pseudomonas fluorescens SBW25, PFLU5191
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006725 | cellular aromatic compound metabolic process |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF001486
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| UniPathway | UPA00157 | beta-ketoadipate pathway | InterPro 5.8-49.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
0 |
| KEGG (InterPro) | 00362 | Benzoate degradation | InterPro 5.8-49.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
0 |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PIRSF | PIRSF001486 | CatC | IPR003464 | Muconolactone delta-isomerase | 1 | 94 | 6.6E-45 |
| NCBIfam | TIGR03221 | JCVI: muconolactone Delta-isomerase | IPR003464 | Muconolactone delta-isomerase | 2 | 91 | 1.5E-46 |
| Pfam | PF02426 | Muconolactone delta-isomerase | IPR026029 | Muconolactone isomerase domain | 1 | 90 | 3.8E-39 |
| SUPERFAMILY | SSF54909 | Dimeric alpha+beta barrel | IPR011008 | Dimeric alpha-beta barrel | 1 | 95 | 3.22E-38 |
| Gene3D | G3DSA:3.30.70.1060 | Dimeric alpha+beta barrel | - | - | 1 | 94 | 5.1E-36 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.