Pseudomonas fluorescens SBW25, PFLU5621

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00892
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005886 plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00688
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF103481 Multidrug resistance efflux transporter EmrE - - 203 284 1.57E-8
PANTHER PTHR22911 ACYL-MALONYL CONDENSING ENZYME-RELATED - - 7 282 1.2E-14
NCBIfam TIGR00688 JCVI: EamA family transporter RarD IPR004626 RarD protein 8 260 2.4E-74
SUPERFAMILY SSF103481 Multidrug resistance efflux transporter EmrE - - 47 145 1.29E-13
Pfam PF00892 EamA-like transporter family IPR000620 EamA domain 8 141 6.2E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.