Pseudomonas fluorescens SBW25, PFLU5622

Cytoplasmic Membrane
Outer Membrane
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006355 regulation of transcription, DNA-templated
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF028103
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
ProSiteProfiles PS51671 ACT domain profile. IPR002912 ACT domain 90 170 7.885
PIRSF PIRSF028103 IPR016867 Glycine cleavage system transcriptional repressor 1 170 5.4E-48
SUPERFAMILY SSF55021 89 167 4.16E-14
CDD cd04869 ACT_GcvR_2 90 165 2.90528E-26
SUPERFAMILY SSF55021 1 68 5.5E-14
Gene3D G3DSA: 1 77 1.3E-19
ProSiteProfiles PS51671 ACT domain profile. IPR002912 ACT domain 5 81 8.619
Gene3D G3DSA: 83 170 1.4E-21
Pfam PF13740 ACT domain 3 67 6.9E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.