Pseudomonas fluorescens SBW25, PFLU5623 (glcB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004474 malate synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00728
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF51645
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006097 glyoxylate cycle
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00728
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG (InterPro) 00620 Pyruvate metabolism InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion 		0
KEGG (InterPro) 00630 Glyoxylate and dicarboxylate metabolism InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion 		0
UniPathway UPA00703 glyoxylate cycle InterPro 5.8-49.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion 		0

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:1.20.1220.12 Malate synthase, domain III IPR044856 Malate synthase, C-terminal superfamily 586 724 9.7E-79
CDD cd00728 malate_synt_G IPR006253 Malate synthase G 9 720 0.0
FunFam G3DSA:3.20.20.360:FF:000002 Malate synthase G - - 203 584 0.0
Hamap MF_00641 Malate synthase G [glcB]. IPR006253 Malate synthase G 1 725 420.363098
PANTHER PTHR42739 MALATE SYNTHASE G IPR006253 Malate synthase G 1 722 0.0
Gene3D G3DSA:3.20.20.360 Malate synthase, domain 3 IPR046363 Malate synthase, N-terminal and TIM-barrel domains 208 585 0.0
Pfam PF01274 Malate synthase IPR001465 Malate synthase 18 697 0.0
Gene3D G3DSA:3.20.20.360 Malate synthase, domain 3 IPR046363 Malate synthase, N-terminal and TIM-barrel domains 1 207 4.0E-65
SUPERFAMILY SSF51645 Malate synthase G IPR011076 Malate synthase superfamily 2 723 0.0
NCBIfam TIGR01345 JCVI: malate synthase G IPR006253 Malate synthase G 4 723 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.