Pseudomonas fluorescens SBW25, PFLU6013
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR36153 | INNER MEMBRANE PROTEIN-RELATED | - | - | 4 | 1166 | 0.0 |
| Pfam | PF06761 | Intracellular multiplication and human macrophage-killing | IPR009612 | IcmF-related | 502 | 792 | 5.4E-82 |
| Coils | Coil | Coil | - | - | 88 | 108 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 120 | 289 | 7.71E-10 |
| Pfam | PF06744 | Type VI secretion protein IcmF C2-like domain | IPR010623 | Type VI secretion system IcmF, C-terminal | 1041 | 1147 | 2.3E-28 |
| Pfam | PF14331 | IcmF-related N-terminal domain | IPR025743 | IcmF-related, N-terminal domain | 190 | 448 | 2.7E-97 |
| NCBIfam | TIGR03348 | JCVI: type VI secretion system membrane subunit TssM | IPR017731 | Type VI secretion system protein TssM1-like | 15 | 1164 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.