Pseudomonas fluorescens SBW25, PFLU6015

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE IPR010263 Type VI secretion system TssK 19 442 0.0
PANTHER PTHR35566 BLR3599 PROTEIN IPR010263 Type VI secretion system TssK 1 443 0.0
NCBIfam TIGR03353 JCVI: type VI secretion system baseplate subunit TssK IPR010263 Type VI secretion system TssK 5 442 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.