Pseudomonas fluorescens SBW25, PFLU6016

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR37625 OUTER MEMBRANE LIPOPROTEIN-RELATED IPR017734 Type VI secretion system, lipoprotein SciN 6 156 1.9E-33
Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 IPR017734 Type VI secretion system, lipoprotein SciN 38 152 1.0E-35
NCBIfam TIGR03352 JCVI: type VI secretion system lipoprotein TssJ IPR017734 Type VI secretion system, lipoprotein SciN 4 156 3.2E-43
Gene3D G3DSA:2.60.40.4150 Type VI secretion system, lipoprotein SciN IPR038706 Type VI secretion protein SciN-like superfamily 29 166 7.0E-36

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.