Pseudomonas fluorescens SBW25, PFLU6020
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR35565:SF3 | CYTOPLASMIC PROTEIN-RELATED | - | - | 10 | 498 | 0.0 |
| TIGRFAM | TIGR03355 | VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family | IPR010269 | Type VI secretion system TssC-like | 20 | 494 | 0.0 |
| Pfam | PF18945 | EvpB/VC_A0108, tail sheath gpW/gp25-like domain | IPR044032 | TssC1, C-terminal | 382 | 493 | 3.6E-43 |
| Pfam | PF05943 | EvpB/VC_A0108, tail sheath N-terminal domain | IPR044031 | TssC1, N-terminal | 70 | 372 | 0.0 |
| PANTHER | PTHR35565 | CYTOPLASMIC PROTEIN-RELATED | IPR010269 | Type VI secretion system TssC-like | 10 | 498 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.