Pseudomonas fluorescens SBW25, PFLU6025 (clpB2)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0016887	ATPase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF07724	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005524	ATP binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PF07724	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Coils	Coil	Coil	-	-	886	887	-
Gene3D	G3DSA:1.10.8.60	-	-	-	789	885	1.1E-8
Coils	Coil	Coil	-	-	523	543	-
Pfam	PF17871	AAA lid domain	IPR041546	ClpA/ClpB, AAA lid domain	373	465	2.9E-28
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	695	713	4.4E-30
PANTHER	PTHR11638	ATP-DEPENDENT CLP PROTEASE	-	-	18	868	0.0
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	566	863	6.61E-63
CDD	cd19499	RecA-like_ClpB_Hsp104-like	-	-	579	787	4.75696E-91
Coils	Coil	Coil	-	-	443	463	-
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	570	787	1.5E-66
CDD	cd00009	AAA	-	-	212	367	4.77374E-15
Gene3D	G3DSA:1.10.1780.10	-	IPR036628	Clp, N-terminal domain superfamily	1	161	6.2E-41
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	617	776	3.1E-8
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	182	373	1.7E-71
Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	IPR003959	ATPase, AAA-type, core	234	367	5.0E-9
Pfam	PF10431	C-terminal, D2-small domain, of ClpB protein	IPR019489	Clp ATPase, C-terminal	789	863	1.5E-13
Gene3D	G3DSA:3.40.50.300	-	IPR027417	P-loop containing nucleoside triphosphate hydrolase	375	564	5.8E-50
NCBIfam	TIGR03345	JCVI: type VI secretion system ATPase TssH	IPR017729	AAA+ ATPase ClpV1	13	873	0.0
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	666	684	4.4E-30
FunFam	G3DSA:3.40.50.300:FF:000025	ATP-dependent Clp protease subunit	-	-	570	787	1.0E-78
FunFam	G3DSA:3.40.50.300:FF:000010	Chaperone clpB 1, putative	-	-	181	373	8.8E-83
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	728	742	4.4E-30
SUPERFAMILY	SSF81923	Double Clp-N motif	IPR036628	Clp, N-terminal domain superfamily	12	131	2.55E-18
PRINTS	PR00300	ATP-dependent Clp protease ATP-binding subunit signature	IPR001270	ClpA/B family	621	639	4.4E-30
SMART	SM01086	ClpB_D2_small_2	IPR019489	Clp ATPase, C-terminal	789	881	1.9E-11
SMART	SM00382	AAA_5	IPR003593	AAA+ ATPase domain	229	374	2.4E-10
Pfam	PF07724	AAA domain (Cdc48 subfamily)	IPR003959	ATPase, AAA-type, core	616	782	9.1E-39
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	IPR027417	P-loop containing nucleoside triphosphate hydrolase	190	515	4.12E-71

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.