Pseudomonas putida F1, Pput_2613

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) IPR006530 YD repeat 140 178 1.8E-6
TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain IPR022385 Rhs repeat-associated core 663 739 4.4E-25
PRINTS PR00394 RHS protein signature IPR001826 RHS protein 684 704 8.4E-14
Pfam PF03527 RHS protein IPR001826 RHS protein 636 670 3.1E-18
TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) IPR006530 YD repeat 39 73 4.7E-4
TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) IPR006530 YD repeat 163 200 2.1E-5
TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) IPR006530 YD repeat 323 360 1.6E-5
Gene3D G3DSA:2.180.10.10 34 739 1.3E-49
Pfam PF14427 Pput_2613-like deaminase IPR027472 Pput2613-like deaminase 740 859 2.5E-53
TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) IPR006530 YD repeat 201 241 7.0E-5
Pfam PF05593 RHS Repeat IPR031325 RHS repeat 11 49 1.3E-6
PRINTS PR00394 RHS protein signature IPR001826 RHS protein 630 650 8.4E-14
TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) IPR006530 YD repeat 2 31 1.2E-6
PRINTS PR00394 RHS protein signature IPR001826 RHS protein 707 726 8.4E-14
Pfam PF05593 RHS Repeat IPR031325 RHS repeat 323 358 8.1E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.