Pseudomonas putida F1, Pput_2623
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | ppf02025 | Biofilm formation - Pseudomonas aeruginosa | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF05943 | Type VI secretion protein, EvpB/VC_A0108, tail sheath | IPR010269 | Type VI secretion protein, EvpB/VC_A0108, tail sheath | 73 | 495 | 0.0 |
| TIGRFAM | TIGR03355 | VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family | IPR010269 | Type VI secretion protein, EvpB/VC_A0108, tail sheath | 25 | 495 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.