Pseudomonas putida W619, PputW619_2500

Cytoplasmic Membrane
Outer Membrane
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP


Database Xref Pathway Version Evidence PMID
KEGG ppw02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.1730.10 IPR038225 T6S-associated protein TagF superfamily 1 192 1.1E-19
Pfam PF09867 TagF N-terminal domain, Type VI secretion system-associated IPR017748 T6S-associated protein TagF 3 129 1.3E-24
TIGRFAM TIGR03373 VI_minor_4: type VI secretion-associated protein, BMA_A0400 family IPR017748 T6S-associated protein TagF 3 134 4.3E-32

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.